chris&barb - I think it looks like something ulcerated, too, but I really don't know what normal internal clam anatomy looks like.
Here is my 20g quarantine tank. I keep about 5 bioballs in my sump to use, but decided against it. I figured if I'm trying to eliminate as many input sources from the main tank, then I should leave those out of the picture. I will conduct water changes instead. The 2 powerheads pictured suck the water through the container filled with clean bioballs, then back out. I think the tank serves its purpose:
This shot is of the clams in the iodine dip. I used the strength that Maxx posted, which was 6 drops per 16 ounces. The duration of the dip was 10 minutes. During this time, I used a turkey baster and blasted the best I could in the shell, and any portion of the mantle I could see. The larger clam did take a leap off of its rock.
Here is a shot of immediately following the iodine dip. I placed the clams in a bucket with phytoplankton. It didn't take long before they opened back up. The second shot is right before I placed them in QT (the phyto bath was about 20 minutes).
Once in the quarantine tank, the clams opened up. I'll see how they look tomorrow. As I was walking up the stairs I heard the bigger clam jump off his rock again.
I really hope this does the trick. I can't imagine doing it again, but I also can't imagine losing either of these guys.